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As of 29-Jun-2022 number of released structures: 12153
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NDB ID: PD0709  PDB ID: 2ASJ 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
17DD_DA807DT808:DA912DT913_EE-1.64-0.5042.8331.1829.51321.073-3.9774.4292.29624.445-3.03823.128
112DD_DA812DDG813:DC907DT908_EE-0.486-0.0243.54-4.11110.19831.194-1.9310.0933.418.2677.36533.03
11DD_DG801DG802:DC918DC919_EE0.652-0.1793.753.183-5.0844.9050.29-0.5193.783-6.616-4.14545.283
12DD_DG802DT803:DA917DC918_EE-0.571-1.1542.8240.9638.23114.241-8.3672.5021.83830.097-3.52116.466
15DD_DG805DG806:DC914DC915_EE1.34-0.9282.6320.1510.5839.571-10.388-5.3031.09647.987-0.67914.261
16DD_DG806DA807:DT913DC914_EE0.1720.8933.537-2.8596.39854.1520.551-0.3773.66.9953.12654.57
19DD_DG809DG810:DC910DC911_EE-0.264-1.23.240.34-1.89623.876-2.2750.7463.319-4.572-0.81923.952
110DD_DG810DT811:DA909DC910_EE-1.053-0.6053.04-1.9632.89729.596-1.741.6653.0315.6463.82729.798
13DD_DT803DT804:DA916DA917_EE0.6850.0942.7244.0025.12937.259-0.413-0.6212.7687.954-6.20637.802
14DD_DT804DG805:DC915DA916_EE-0.242-0.9684.9032.25419.7737.621-4.240.6653.92528.364-3.23442.39
18DD_DT808DG809:DC911DA912_EE0.45-0.5383.831-5.21-7.52744.320.092-1.1343.796-9.8536.8245.209
111DD_DT811DA812:DT908DA909_EE0.9350.073.9288.0944.90646.022-0.41-0.3534.0156.198-10.22646.933
119HH_DA1807DT1808:DA1912DT1913_JJ-0.769-0.183.1470.95.77331.267-1.3371.563.04310.596-1.65131.795
124HH_DA1812DDG1813:DC1907DT1908_JJ0.00.423.5820.7925.80744.44-0.0310.0793.6067.639-1.04244.806
113HH_DG1801DG1802:DC1918DC1919_JJ2.191-1.0492.967-6.0685.76525.842-3.396-5.8892.12712.4813.13827.141
114HH_DG1802DT1803:DA1917DC1918_JJ-1.510.2113.2980.7725.38836.827-0.3912.473.2648.471-1.21437.213
117HH_DG1805DG1806:DC1914DC1915_JJ1.5680.183.5425.4016.01137.989-0.552-1.6223.7079.109-8.18438.808
118HH_DG1806DA1807:DT1913DC1914_JJ-0.4221.0722.618-2.1728.98234.3010.6460.4242.82114.8973.60235.488
121HH_DG1809DG1810:DC1910DC1911_JJ0.151-0.7033.093-4.1310.92524.307-1.911-1.5372.9972.1759.71624.667
122HH_DG1810DT1811:DA1909DC1910_JJ-0.864-0.4672.965-1.2961.45927.743-1.2891.5152.9733.0382.69927.81
115HH_DT1803DT1804:DA1916DA1917_JJ0.371-0.7282.8830.5263.19530.346-1.937-0.6142.7996.081-1.00130.514
116HH_DT1804DG1805:DC1915DA1916_JJ0.235-0.3664.1341.85122.36427.194-4.761-0.0463.00440.021-3.31235.122
120HH_DT1808DG1809:DC1911DA1912_JJ-0.249-0.9393.972.5986.08635.377-2.550.8433.7359.908-4.2335.971
123HH_DT1811DA1812:DT1908DA1909_JJ0.448-0.853.87-3.6499.57939.272-2.456-1.1143.52313.9665.3240.537

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.