A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: PR0179  PDB ID: 2B2G 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11R_A302:U316_R0.144-0.1980.8994.662-24.846-4.889
13R_G304:C314_R-0.058-0.0980.3683.525-15.133-0.604
14R_G306:C313_R-0.138-0.1470.409-0.898-11.859-5.025
15R_G307:C312_R-0.207-0.1730.4137.992-2.0650.63
12R_U303:A315_R-0.146-0.250.613-2.764-23.271-0.839
16S_A402:U416_S0.1970.0210.18525.962-28.376-3.941
18S_G404:C414_S-0.879-1.181.287-5.454-4.3080.67
19S_G406:C413_S-0.232-0.0710.318-5.06-17.624-0.25
110S_G407:C412_S-0.198-0.0980.177-2.382-0.726-1.043
17S_U403:A415_S0.022-0.001-0.2721.886-7.023-12.249

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.