2B6G: Base Pair Morphology Parameters

A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Nov-2022 number of released structures: 12471

Search for released structures

NDB ID: 2B6G PDB ID: 2B6G

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	3	B_A3:U17_B	0.006	-0.07	0.09	1.774	-9.046	-2.541
1	6	B_C6:G14_B	0.096	-0.163	0.035	-0.549	-4.199	-1.264
1	8	B_C8:G11_B	0.078	-0.174	-0.11	2.28	9.628	-2.611
1	1	B_G1:C19_B	-0.032	-0.177	-0.006	-0.273	0.018	-2.898
1	2	B_G2:U18_B	-2.051	-0.375	0.02	0.818	-1.374	-1.88
1	4	B_G4:U16_B	-2.007	-0.378	0.059	3.091	-3.099	-0.684
1	5	B_G5:C15_B	-0.113	-0.195	0.151	2.327	-14.741	-2.151
1	7	B_U7:A13_B	-0.009	-0.071	-0.032	1.071	-0.292	-2.259

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.