2B6G: Base Pair Morphology Step Parameters

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NDB ID: 2B6G PDB ID: 2B6G

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	3	BB_A3G4:U16U17_BB	0.696	-1.366	3.392	-0.391	5.513	27.816	-4.057	-1.511	3.06	11.325	0.804	28.35
1	6	BB_C6U7:A13G14_BB	-0.444	-1.267	3.793	-1.242	-2.161	35.932	-1.689	0.511	3.872	-3.497	2.009	36.015
1	1	BB_G1G2:U18C19_BB	0.091	-1.964	3.302	-3.445	11.515	28.969	-5.592	-0.753	2.343	21.869	6.542	31.314
1	2	BB_G2A3:U17U18_BB	-0.399	-1.534	3.362	-0.4	5.217	32.295	-3.619	0.64	3.088	9.303	0.713	32.705
1	4	BB_G4G5:C15U16_BB	-0.328	-1.603	3.204	-1.168	8.74	33.96	-3.872	0.383	2.73	14.659	1.959	35.054
1	5	BB_G5C6:G14C15_BB	-0.294	-1.549	3.478	-1.924	8.388	34.777	-3.743	0.198	3.046	13.774	3.159	35.793
1	7	BB_U7C8:G11A13_BB	0.0	-1.45	3.265	1.671	20.265	22.625	-6.197	0.283	1.492	42.29	-3.487	30.331

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.