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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID:
2B7G
PDB ID:
2B7G
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
3
A_A3:U17_A
-0.271
-0.155
-0.098
5.692
-16.269
-4.516
1
6
A_C6:G14_A
0.028
-0.158
-0.145
2.054
-12.29
-4.742
1
1
A_G1:C19_A
-0.184
-0.165
0.023
-0.403
-5.012
-7.137
1
2
A_G2:U18_A
-1.998
-0.356
0.066
6.426
-9.997
-5.325
1
4
A_G4:U16_A
-1.841
-0.369
-0.134
3.749
-12.465
-4.532
1
5
A_G5:C15_A
-0.242
-0.217
-0.226
1.727
-14.051
-5.072
1
7
A_U7:A13_A
-0.014
-0.064
-0.01
4.99
-4.769
-4.547
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.