A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 28-Sep-2022 number of released structures: 12311
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NDB ID: PD0836  PDB ID: 2BNW 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
17FF_DA25DT26:DA10DT11_EE0.258-0.6893.3772.258-4.21733.156-0.468-0.0593.445-7.342-3.93133.489
114FF_DA32DT33:DA3DT4_EE0.283-0.9373.224-3.037-0.12132.132-1.664-1.0393.188-0.2185.47232.271
11FF_DC19DT20:DA16DG17_EE-0.264-0.1663.0316.0683.47235.775-0.7081.1962.925.587-9.76336.43
117FG_DC35DG1:DC35DG1_HE0.288-5.2183.784.936-9.15-117.5913.1480.2243.5155.3442.882-117.876
14FF_DG22DT23:DA13DC14_EE0.663-0.153.2521.587-1.91232.2440.069-0.9093.283-3.435-2.85232.337
16FF_DG24DA25:DT11DC12_EE0.117-0.3663.3510.203-4.70440.8090.005-0.1443.372-6.719-0.2941.068
111FF_DG29DT30:DA6DC7_EE0.2820.0232.998-0.3070.48327.693-0.059-0.6572.9951.0090.64227.699
113FF_DG31DA32:DT4DC5_EE0.374-0.5463.7157.164-1.5338.459-0.6050.4313.74-2.298-10.75639.125
12FF_DT20DT21:DA15DA16_EE0.303-0.1973.2012.089-0.84134.759-0.204-0.1943.217-1.406-3.49234.83
13FF_DT21DG22:DC14DA15_EE-0.165-0.7783.607-3.4842.51238.504-1.51-0.223.5523.7945.26338.733
15FF_DT23DG24:DC12DA13_EE-0.931.0713.315-0.164-8.32637.8192.621.3853.025-12.6590.24938.692
18FF_DT26DT27:DA9DA10_EE-0.159-0.5553.36-1.037-2.74434.649-0.4960.1023.396-4.5971.73834.769
19FF_DT27DT28:DA8DA9_EE0.121-0.0863.235-0.8-6.94440.7620.616-0.2563.204-9.8821.13841.332
110FF_DT28DG29:DC7DA8_EE-0.134-0.4933.6221.6410.24739.357-0.7640.4143.610.367-2.43639.39
112FF_DT30DG31:DC5DA6_EE-0.4161.3333.275-1.243-15.31840.1213.2540.4532.63-21.4021.73742.85
115FF_DT33DT34:DA2DA3_EE-0.11-0.7073.4252.734-5.05435.52-0.3810.5923.472-8.218-4.44635.967
116FF_DT34DC35:DG1DA2_EE0.2830.0013.155-2.5782.83735.066-0.402-0.8353.1184.694.26335.269
119GG_DA2DA3:DT33DT34_HH0.44-0.4633.361.213-2.35734.112-0.402-0.5513.396-4.011-2.06434.212
120GG_DA3DT4:DA32DT33_HH-0.281-0.1693.142.707-1.55137.106-0.0670.7843.116-2.432-4.24537.232
123GG_DA6DC7:DG29DT30_HH-0.0680.2233.0590.92-0.05443.030.3090.1773.057-0.073-1.25443.039
125GG_DA8DA9:DT27DT28_HH-0.2840.2253.353-0.773-3.83642.6630.70.3113.326-5.2591.0642.834
126GG_DA9DA10:DT26DT27_HH-0.424-0.7673.369-2.641-7.62634.553-0.0730.2863.476-12.6264.37335.455
127GG_DA10DT11:DA25DT26_HH1.034-0.533.2933.2510.73535.541-0.972-1.2083.3611.2-5.31235.692
130GG_DA13DC14:DG22DT23_HH0.2190.7143.097-4.178-0.13833.1251.265-1.0353.044-0.2417.29233.38
132GG_DA15DA16:DT20DT21_HH-1.7511.0793.290.732-1.13241.9711.6232.5193.232-1.58-1.02241.991
133GG_DA16DG17:DC19DT20_HH0.7870.4443.394-5.368-0.71541.5320.698-1.6753.265-1.0037.53241.868
122GG_DC5DA6:DT30DG31_HH0.5260.6252.895-0.84.70826.2160.247-1.3312.94310.2711.74526.64
124GG_DC7DA8:DT28DG29_HH0.3540.3563.325-1.476-0.01427.7890.743-1.0953.302-0.033.0727.827
129GG_DC12DA13:DT23DG24_HH-0.369-0.1882.9493.3411.13221.376-3.5421.8052.46327.542-8.26424.299
131GG_DC14DA15:DT21DG22_HH0.9461.2633.0954.5042.83836.2111.629-0.9013.2724.536-7.19936.587
118GG_DG1DA2:DT34DC35_HH-1.2510.23.159-5.2053.44239.62-0.0981.2353.2965.0397.62240.089
121GG_DT4DC5:DG31DA32_HH0.002-0.1253.7-3.569-1.27140.476-0.02-0.4513.689-1.8325.14540.646
128GG_DT11DC12:DG24DA25_HH0.143-0.1373.3470.456-2.04946.2230.004-0.1423.351-2.608-0.58146.268

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.