A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 25-May-2022 number of released structures: 12098
Search for released structures

NDB ID: PR0248  PDB ID: 2BS1 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12RR_G7U8:A14C15_RR-0.33-1.3733.176-1.0356.81631.97-3.5360.422.8412.1981.85232.686
11RR_U6G7:C15A16_RR0.56-1.2183.6481.96918.83545.842-2.938-0.5152.98223.057-2.4149.404
13RR_U8C9:G13A14_RR-0.247-2.1193.375-4.7948.77623.879-6.998-0.6862.45720.11810.9925.86
15SS_G7U8:A14C15_SS-1.107-1.5773.0932.51212.84543.252-3.0621.642.48716.968-3.31845.098
14SS_U6G7:C15A16_SS0.922-2.2813.123-2.90424.26834.643-5.025-1.5031.25135.7784.28142.18
16SS_U8C9:G13A14_SS-0.543-1.8973.457-4.0527.01417.172-9.262-0.382.55121.9712.69218.974

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.