A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 2D19  PDB ID: 2D19 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
114A_A11:U8_B0.8140.030.5223.281-12.1193.029
12A_C2:G16_A0.642-0.1970.53-0.209-6.87-3.389
113A_C10:G9_B-0.933-0.1010.4364.552-11.182-10.209
115A_C12:G7_B0.747-0.1870.156-7.902-18.0661.615
11A_G1:C17_A-0.849-0.2520.74712.411-6.752-3.343
14A_G4:C14_A-1.025-0.15-0.224-4.3688.5560.471
110A_G7:C12_B0.1540.0020.3485.999-17.6720.397
112A_G9:C10_B0.83-0.0250.216-4.03-9.901-9.169
13A_U3:G15_A1.748-0.3750.348-1.818-13.922-1.942
111A_U8:A11_B-0.7830.0030.658-2.232-13.6451.273
19B_A5:A13_B1.4680.447-0.681-35.908-14.843-178.104
16B_C2:G16_B0.565-0.1610.555-1.337-7.063-3.14
15B_G1:C17_B-0.896-0.30.75912.604-8.47-4.381
18B_G4:C14_B-1.09-0.2360.113-8.892-4.802-0.757
17B_U3:G15_B1.626-0.3440.353-1.817-10.625-0.156

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.