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As of 4-Dec-2019 number of released structures: 10490
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NDB ID: GDL003  PDB ID: 2DND 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
14AA_DA4DA5:DT20DT21_BB0.036-0.3623.695-0.7151.37538.122-0.75-0.1573.6792.1041.09538.153
15AA_DA5DA6:DT19DT20_BB-0.678-0.7482.785-2.2973.4741.2-1.3730.7512.7484.9153.25541.4
16AA_DA6DT7:DA18DT19_BB0.414-0.873.7710.77-0.7831.435-1.437-0.5963.799-1.439-1.4231.453
11AA_DC1DG2:DC23DG24_BB0.2730.5563.553-1.5870.46745.0110.68-0.5123.5470.612.07245.04
13AA_DC3DA4:DT21DG22_BB-0.7710.7453.259-2.1648.5829.913-0.311.0083.38316.1824.08231.165
111AA_DC11DG12:DC13DG14_BB-0.0830.9543.3828.4214.13639.9980.8891.0783.3755.948-12.1141.04
12AA_DG2DC3:DG22DC23_BB0.3440.1933.4536.852-5.10634.8121.0940.4883.397-8.379-11.24435.814
110AA_DG10DC11:DG14DC15_BB-0.692-0.2793.919-1.92-11.78234.221.5770.7843.836-19.3083.14636.183
17AA_DT7DT8:DA17DA18_BB-0.362-0.433.313-0.798-3.2231.988-0.1890.5083.347-5.8231.44332.155
18AA_DT8DT9:DA16DA17_BB0.390.0473.2553.5776.21439.33-0.647-0.1593.2469.141-5.26139.953
19AA_DT9DG10:DC15DA16_BB0.2931.6872.692-9.242-5.89735.6283.249-1.4092.251-9.36814.68237.224

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.