A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search for released structures

NDB ID: AH0024  PDB ID: 2DQQ 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11AA_DC1OMU2:A17G18_BB-0.105-2.4553.873-8.861-1.53826.949-4.578-2.2593.844-3.18918.37628.384
13AA_DC3DT4:A15G16_BB-0.093-1.4363.3470.8816.29331.635-3.6840.3213.00911.399-1.59632.25
16AA_DC6DT7:A12G13_BB-0.097-1.3123.1961.729.64727.299-4.5640.5412.58119.654-3.50428.973
14AA_DT4OMU5:A14A15_BB0.43-1.1673.487-3.2524.60130.678-3.076-1.4413.228.6066.08131.179
17AA_DT7DT8:A11A12_BB-0.47-1.6143.144-1.0566.78924.738-5.3590.7912.63215.472.40525.66
18AA_DT8DC9:G10A11_BB0.494-1.4383.551-1.4496.46736.868-3.128-0.9683.24110.1252.26937.438
12AA_OMU2DC3:G16A17_BB-0.828-1.4093.095-0.8878.59232.135-3.7491.3152.66115.1821.56733.246
15AA_OMU5DC6:G13A14_BB-0.564-1.7643.2810.27416.45730.827-5.1360.9792.09428.549-0.47534.852

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.