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As of 18-May-2022 number of released structures: 12082
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NDB ID: PR0219  PDB ID: 2DU3 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14D_A904:U968_D-0.027-0.3040.892-9.316-5.7998.734
123D_A912:U922_D-0.045-0.1050.272-28.638-10.1868.55
125D_A914:A946_D-2.958-1.805-0.4311.369-43.128132.751
12D_C902:G970_D0.034-0.2810.90225.7359.9846.83
13D_C903:G969_D0.076-0.422-1.202-7.71711.291-6.593
122D_C911:G923_D0.167-0.236-0.854-4.56-13.7366.732
117D_C939:G929_D0.25-0.06-0.59818.133-15.3782.847
118D_C940:G928_D0.199-0.041-0.4378.3066.1520.465
120D_C942:G925_D1.3241.3190.539-41.4388.321-41.323
18D_C948:G964_D0.137-0.0790.3680.65-13.22-3.603
19D_C949:G963_D0.158-0.086-0.1117.784-18.4090.662
110D_C950:G962_D0.075-0.017-0.1475.673-8.3991.632
11D_G901:C971_D-0.182-0.0821.84542.9825.8970.018
15D_G905:C967_D-0.182-0.03-0.166-9.914-3.4090.561
16D_G906:C966_D-0.081-0.140.7675.174-13.4090.042
17D_G907:C965_D0.003-0.4341.015-25.331-29.711-13.283
121D_G910:C924_D-0.17-0.052-0.4-4.646-10.480.196
124D_G913:G909_D5.3240.2251.464-29.18622.332-111.472
126D_G915:C947_D0.0324.734-1.5771.082-11.165162.774
115D_G918:C955_D-0.350.132-0.31-33.605-30.5645.958
119D_G941:C927_D-0.249-0.0310.006-11.488-9.161.762
111D_G951:C961_D-0.17-0.104-0.105-1.088-10.3050.852
112D_G952:C960_D0.005-0.068-0.154-16.418-15.0025.897
127D_U920:A958_D-3.0873.145-0.57851.875-2.256-107.754
116D_U938:A930_D0.074-0.15-0.01317.127-14.7175.825
113D_U953:A957_D4.415-2.6040.18-5.1318.508-85.224
114D_U954:G917_D0.297-6.346-0.09720.0334.267-107.464

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.