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As of 25-May-2022 number of released structures: 12098
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NDB ID: UR0113  PDB ID: 2EEU 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
13AA_A17C18:G78U79_AA0.603-1.5083.1352.1785.74329.493-3.985-0.752.83311.128-4.2230.112
15AA_A19U20:A76U77_AA-0.246-1.243.333-2.38813.21730.789-4.2130.0542.60823.5394.25233.526
17AA_A21U51:U47U75_AA-1.7776.3642.07715.7423.904158.2333.2320.9322.0711.987-8.013158.453
121AA_A59C60:G38U67_AA1.997-0.4343.3775.547.0154.344-0.909-1.8143.4747.617-6.0255.019
124AA_A64G62:U63A35_AA-2.815-4.4161.64321.59-172.32636.751-0.0661.6784.345-88.311-11.064173.996
14AA_C18A19:U77G78_AA0.03-1.5343.3330.78212.33632.181-4.3960.0632.58821.298-1.3534.415
113AA_C28G29:C41G42_AA-0.547-1.9153.077-2.9027.429.551-4.920.5322.57414.1865.56430.578
110AA_C53U25:A45G46_AA-2.032-0.463.746-16.677.24151.979-1.0340.9754.0827.9918.39354.856
116AA_C54G55:C71G72_AA-1.029-1.7073.0930.7628.93334.089-3.9881.8012.55614.92-1.27335.215
120AA_C58A59:U67G68_AA0.224-1.6933.2951.54.73133.229-3.685-0.1493.0398.216-2.60533.588
122AA_C60C61:G37G38_AA-0.555-0.6253.073-3.4026.85428.633-2.5670.4192.89413.5546.72829.617
123AA_C61A64:A35G37_AA-3.453-1.1154.193-67.567158.431171.621-0.6981.6664.20679.22533.787179.433
11AA_G15G16:C80C81_AA0.261-1.5223.212-0.45.97227.038-4.53-0.6352.81312.5780.84127.68
12AA_G16A17:U79C80_AA-0.344-1.5773.052-3.468.90634.554-3.6920.1212.614.655.69235.812
112AA_G27C28:G42C43_AA0.799-2.2363.362-1.2172.67229.169-4.991-1.8393.1145.2882.40829.313
114AA_G29U30:A40C41_AA-0.103-1.2793.3020.90610.69432.847-3.7330.3082.75918.312-1.55234.51
117AA_G55G56:C70C71_AA-0.101-0.5023.092-1.1035.8528.798-2.159-0.0212.93611.6072.18829.394
118AA_G56G57:U69C70_AA0.017-1.5672.966-3.0118.60726.274-4.987-0.6382.32918.2486.38427.785
119AA_G57C58:G68U69_AA0.39-1.2383.269-1.7881.60944.303-1.787-0.6813.2072.1312.36844.365
16AA_U20A21:U75A76_AA0.542-1.5252.8164.7816.5127.714-4.899-0.3381.72730.981-8.9732.523
111AA_U25G27:C43A45_AA-1.135-4.2195.954-1.59121.39858.851-5.6760.9784.36221.0311.56462.31
115AA_U30G31:C39A40_AA0.729-1.8633.228-1.9365.51631.036-4.378-1.6762.81410.1963.57931.568
18AA_U51U52:A22U47_AA0.157-1.0563.373-2.86621.9284.08-8.923-1.214-0.43379.00510.32722.483
19AA_U52C53:G46A22_AA1.9210.3962.5059.9178.34144.161-0.098-1.7412.87610.821-12.86445.931

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.