A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 30-Nov-2022 number of released structures: 12490
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NDB ID: 2F87  PDB ID: 2F87 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_C3:G10_A0.823-0.506-1.039-6.442-6.023.448
11A_G1:C12_A-0.886-0.246-0.113.27511.933-1.762
12A_G2:C11_A0.4010.062-0.1219.3535.512-1.699
15A_G5:G8_A7.52-5.6711.67332.212-0.608-35.639
14A_U4:G9_A1.588-0.426-0.6156.77515.614-11.15

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.