2FLL: Base Pair Morphology Parameters

A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237

Search for released structures

NDB ID: PD0777 PDB ID: 2FLL

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	1	P_DA867:DT847_T	0.088	-0.189	0.324	3.671	-8.429	-3.977
1	4	P_DA870:DT844_T	0.093	-0.138	-0.081	12.591	-6.551	-3.142
1	5	P_DC871:DG843_T	0.098	-0.185	-0.298	15.622	-12.4	-3.139
1	6	P_DC872:DG842_T	0.148	-0.223	-0.161	11.278	-13.856	-3.108
1	2	P_DG868:DC846_T	-0.202	-0.071	0.178	6.116	-6.052	0.191
1	3	P_DG869:DC845_T	-0.081	0.021	-0.009	-0.297	-3.493	-1.169
1	7	P_DOC873:DG841_T	0.252	-0.21	0.068	-1.47	-1.436	1.409

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.