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As of 11-May-2022 number of released structures: 12077
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NDB ID:
UR0086
PDB ID:
2GQ4
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
1
K_0C79:0G97_L
-0.787
-0.247
0.044
9.685
5.828
4.764
1
6
K_0C84:0G92_L
-1.008
0.221
0.099
-2.108
3.65
-7.266
1
3
K_0G81:0U95_L
2.401
-0.551
-0.239
-9.78
9.407
-0.118
1
4
K_0G82:0C94_L
0.191
-0.162
0.207
0.578
10.184
-1.053
1
5
K_0G83:0C93_L
0.194
-0.127
0.024
-8.472
15.525
-2.121
1
7
K_0G85:0C91_L
0.368
-0.1
0.283
1.313
13.781
-0.689
1
8
K_0G86:0C90_L
0.191
-0.161
-0.012
-7.4
15.026
5.521
1
2
K_0U80:0G96_L
-2.488
-0.551
-0.178
15.208
15.113
-0.577
1
9
M_0C79:0G97_N
-0.177
-0.089
0.046
-3.643
-6.549
2.748
1
14
M_0C84:0G92_N
-0.229
-0.116
-0.025
1.235
13.954
1.685
1
11
M_0G81:0U95_N
2.396
-0.607
-0.132
-4.756
10.451
1.101
1
12
M_0G82:0C94_N
0.174
-0.077
0.109
-1.446
8.661
2.605
1
13
M_0G83:0C93_N
0.268
-0.097
-0.018
-2.375
13.804
-0.041
1
15
M_0G85:0C91_N
0.157
-0.041
0.115
-8.304
18.407
-2.545
1
16
M_0G86:0C90_N
0.212
-0.138
0.092
-7.457
9.243
3.82
1
10
M_0U80:0G96_N
-2.507
-0.603
-0.303
11.238
8.861
1.256
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.