2HNS: Base Pair Morphology Step Parameters

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NDB ID: 2HNS PDB ID: 2HNS

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	7	AA_A7U8:A15U16_AA	0.001	-0.865	3.852	0.483	16.289	31.406	-4.133	0.079	3.051	27.867	-0.827	35.287
1	3	AA_C3G4:C19G20_AA	-0.2	-0.756	4.361	-0.108	2.114	33.404	-1.775	0.323	4.307	3.673	0.187	33.469
1	1	AA_G1G2:C21C22_AA	-0.091	-0.685	3.982	-1.453	16.597	30.254	-4.186	-0.111	3.191	29.185	2.554	34.444
1	2	AA_G2C3:G20C21_AA	0.125	-0.671	3.427	0.163	9.621	33.427	-2.626	-0.183	3.12	16.311	-0.276	34.746
1	4	AA_G4U5:G18C19_AA	-0.008	-1.251	3.38	1.21	11.703	36.461	-3.348	0.16	2.857	18.133	-1.875	38.25
1	6	AA_G6A7:U16C17_AA	0.148	-0.842	3.668	-1.003	18.272	36.016	-3.436	-0.337	2.922	27.478	1.508	40.261
1	5	AA_U5G6:C17G18_AA	-0.251	-0.939	3.574	2.492	21.235	25.946	-5.124	0.845	2.18	39.788	-4.67	33.503
1	8	AA_U8C9:G14A15_AA	-0.077	-0.886	3.896	0.826	11.762	28.347	-4.323	0.331	3.274	22.81	-1.603	30.655

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.