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As of 9-Feb-2023 number of released structures: 12635
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NDB ID: PD0845  PDB ID: 2HVI 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15B_DA25:DT8_C0.3120.053-0.012-16.366-12.351.805
11B_DC21:DG12_C1.5240.0850.4951.108-39.56322.549
12B_DC22:DG11_C-0.192-0.0390.604-9.783-14.57-1.375
16B_DC26:DG7_C0.490.00.051-9.773.4115.107
18B_DC28:DG5_C0.31-0.13-0.112.806-8.0024.392
19B_DDG29:DC4_C-0.432-0.073-0.044-3.569-8.6285.671
14B_DG24:DC9_C-0.305-0.205-0.203-3.344-19.9393.11
13B_DT23:DA10_C0.006-0.0550.092-5.665-13.129-0.03
17B_DT27:DA6_C0.162-0.1070.0075.138-5.3565.41
114E_DA25:DT8_F0.357-0.034-0.055-15.161-11.2632.258
110E_DC21:DG12_F-0.074-0.280.609-12.645-23.521-0.823
111E_DC22:DG11_F-0.084-0.040.681-12.71-8.299-1.237
115E_DC26:DG7_F0.381-0.056-0.053-7.9663.4523.945
117E_DC28:DG5_F0.31-0.095-0.1687.117-6.2273.937
118E_DDG29:DC4_F-0.224-0.149-0.051-3.275-5.9473.68
113E_DG24:DC9_F-0.432-0.273-0.185-3.99-21.1672.714
112E_DT23:DA10_F-0.089-0.0160.216-5.986-11.437-3.289
116E_DT27:DA6_F-0.052-0.191-0.1556.732-9.5975.736

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.