2I91: Base Pair Morphology Step Parameters

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NDB ID: PR0232 PDB ID: 2I91

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	5	CC_A5C6:G3U4_DD	-0.572	-1.788	3.0	-2.08	-0.742	37.098	-2.713	0.641	3.061	-1.165	3.266	37.162
1	2	CC_C2C3:G6G7_DD	-1.137	-1.954	3.769	-6.453	5.918	29.115	-5.075	0.702	3.48	11.449	12.485	30.376
1	3	CC_C3U4:A5G6_DD	0.691	-1.558	3.089	3.147	10.951	25.363	-5.521	-0.786	2.299	23.488	-6.751	27.767
1	6	CC_C6C7:G2G3_DD	0.336	-1.638	3.216	4.595	1.144	40.444	-2.479	0.016	3.188	1.648	-6.619	40.708
1	1	CC_G1C2:G7C8_DD	-0.026	-1.97	3.514	3.784	-4.88	28.224	-2.73	0.999	3.759	-9.859	-7.645	28.878
1	4	CC_U4A5:U4A5_DD	-0.631	-1.239	3.393	-7.3	7.378	32.257	-3.341	-0.116	3.108	12.87	12.734	33.843
1	11	EE_A5C6:G3U4_FF	-0.157	-1.791	2.987	-4.854	3.283	38.016	-3.084	-0.301	2.826	5.003	7.398	38.449
1	8	EE_C2C3:G6G7_FF	-1.414	-2.188	2.98	4.968	-0.603	20.507	-5.756	5.669	2.629	-1.663	-13.693	21.102
1	9	EE_C3U4:A5G6_FF	0.465	-1.368	3.233	-3.728	9.403	32.291	-3.759	-1.357	2.673	16.412	6.506	33.798
1	12	EE_C6C7:G2G3_FF	-0.371	-1.526	3.252	4.867	0.977	31.419	-2.96	1.548	3.113	1.791	-8.918	31.799
1	7	EE_G1C2:G7C8_FF	-0.37	-2.382	3.509	-1.62	3.551	31.012	-5.118	0.369	3.237	6.608	3.016	31.25
1	10	EE_U4A5:U4A5_FF	-1.053	-1.184	3.366	-0.616	9.884	33.284	-3.476	1.674	2.924	16.799	1.047	34.686

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.