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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 26-Jan-2023 number of released structures: 12597
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NDB ID:
2JSG
PDB ID:
2JSG
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
1
A_C27:G43_A
0.158
-0.062
-0.034
2.455
4.562
-4.689
1
2
A_C28:G42_A
0.139
-0.077
0.022
3.063
6.39
-5.563
1
4
A_C30:G40_A
0.232
-0.117
0.137
-0.822
4.025
-2.941
1
5
A_C31:G39_A
0.035
-0.053
0.062
-0.675
3.588
-5.884
1
6
A_C32:A38_A
3.798
-0.493
1.156
-0.351
-1.283
-0.425
1
3
A_U29:A41_A
-0.113
0.059
0.113
-0.799
2.532
-8.293
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.