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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 26-Jan-2023 number of released structures: 12597
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NDB ID:
2JSG
PDB ID:
2JSG
 
Base Pair Morphology Step Parameters
CSV Format
Model Number
Step Number
Step Name
Shift
Slide
Rise
Tilt
Roll
Twist
X-Displacement
Y-Displacement
Helical Rise
Inclination
Tip
Helical Twist
1
1
AA_C27C28:G42G43_AA
-0.192
-1.702
3.347
-0.218
10.835
31.383
-4.696
0.302
2.632
19.323
0.39
33.157
1
2
AA_C28U29:A41G42_AA
-0.178
-1.807
3.532
-0.267
10.478
30.648
-5.082
0.273
2.781
19.135
0.487
32.35
1
4
AA_C30C31:G39G40_AA
-0.167
-1.693
3.311
1.65
11.239
31.888
-4.597
0.534
2.572
19.692
-2.891
33.802
1
5
AA_C31C32:A38G39_AA
0.606
-1.358
4.286
-3.198
-16.253
42.756
0.216
-1.167
4.442
-21.359
4.203
45.712
1
3
AA_U29C30:G40A41_AA
0.276
-1.601
3.68
-0.404
-3.305
32.412
-2.193
-0.572
3.816
-5.902
0.722
32.578
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.