2JSG: Base Pair Morphology Step Parameters

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As of 26-Jan-2023 number of released structures: 12597

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NDB ID: 2JSG PDB ID: 2JSG

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_C27C28:G42G43_AA	-0.192	-1.702	3.347	-0.218	10.835	31.383	-4.696	0.302	2.632	19.323	0.39	33.157
1	2	AA_C28U29:A41G42_AA	-0.178	-1.807	3.532	-0.267	10.478	30.648	-5.082	0.273	2.781	19.135	0.487	32.35
1	4	AA_C30C31:G39G40_AA	-0.167	-1.693	3.311	1.65	11.239	31.888	-4.597	0.534	2.572	19.692	-2.891	33.802
1	5	AA_C31C32:A38G39_AA	0.606	-1.358	4.286	-3.198	-16.253	42.756	0.216	-1.167	4.442	-21.359	4.203	45.712
1	3	AA_U29C30:G40A41_AA	0.276	-1.601	3.68	-0.404	-3.305	32.412	-2.193	-0.572	3.816	-5.902	0.722	32.578

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.