A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search for released structures

NDB ID: 2JWV  PDB ID: 2JWV 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_A2:U28_A-0.285-0.1040.298-0.033-6.997-2.419
13A_A4:U26_A-0.1-0.1320.0930.353-15.434-5.296
16A_A9:G22_A-6.281-3.686-1.7422.07614.038-8.772
17A_A10:U21_A-0.261-0.152-0.219-1.769-4.346-0.118
18A_A11:U20_A0.216-0.075-0.0931.032-6.692-1.455
14A_C5:G25_A0.25-0.1310.0641.612-8.355-2.17
19A_C12:G19_A0.275-0.127-0.1295.9099.235-1.882
111A_G14:A17_A5.922-5.1111.58722.66911.4422.448
12A_U3:A27_A0.102-0.113-0.006-0.049-12.788-3.22
15A_U7:C24_A-0.031-2.8391.96211.4550.48515.009
110A_U13:G18_A2.401-0.0140.5511.80519.70919.959

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.