2JWV: Base Pair Morphology Step Parameters

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As of 18-May-2022 number of released structures: 12082

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NDB ID: 2JWV PDB ID: 2JWV

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_A2U3:A27U28_AA	-0.007	-1.512	3.411	3.028	5.924	33.289	-3.545	0.5	3.092	10.214	-5.221	33.928
1	3	AA_A4C5:G25U26_AA	0.259	-1.474	3.4	-0.379	7.147	33.176	-3.666	-0.505	3.023	12.339	0.654	33.918
1	5	AA_A9A10:U21G22_AA	0.466	-0.595	4.296	-6.18	-0.755	55.38	-0.58	-0.967	4.233	-0.81	6.627	55.701
1	6	AA_A10A11:U20U21_AA	-0.2	-1.633	3.36	-0.362	9.118	29.876	-4.694	0.306	2.756	17.188	0.683	31.208
1	7	AA_A11C12:G19U20_AA	-0.046	-1.838	3.351	-1.271	7.879	29.883	-4.907	-0.148	2.787	14.946	2.412	30.907
1	4	AA_C5U7:C24G25_AA	-0.145	-2.61	4.907	5.492	2.136	40.894	-4.04	1.078	4.713	3.039	-7.812	41.298
1	8	AA_C12U13:G18G19_AA	0.823	-1.574	3.15	-5.482	22.579	33.565	-4.308	-1.681	1.662	34.451	8.365	40.631
1	2	AA_U3A4:U26A27_AA	-0.101	-1.583	3.119	0.046	13.41	29.787	-4.815	0.187	2.22	24.579	-0.085	32.604
1	9	AA_U13G14:A17G18_AA	-1.582	-1.103	2.974	-1.687	11.801	41.516	-2.517	2.008	2.639	16.249	2.323	43.121

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.