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As of 4-Dec-2019 number of released structures: 10490
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NDB ID: 2K1N  PDB ID: 2K1N 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11E_DA1:DT25_F0.333-0.012-0.033-1.5661.181-4.603
14E_DA4:DT22_F0.2780.077-0.216-1.5272.3174.287
18E_DA8:DT18_F0.373-0.019-0.448-4.7465.426-4.202
110E_DA10:DT16_F0.2070.145-0.334-2.7432.862-0.068
111E_DA11:DT15_F0.1490.174-0.324-1.5943.984-0.007
114E_DA14:DT12_F0.3880.108-0.348-2.5354.1222.311
119E_DA19:DT7_F0.3390.094-0.476-4.13.032.826
120E_DA20:DT6_F0.0490.053-0.293-1.0612.9135.463
121E_DA21:DT5_F0.2910.067-0.368-1.6734.7844.143
19E_DC9:DG17_F0.2590.074-0.2840.8664.4111.999
122E_DC22:DG4_F0.574-0.099-0.4763.2416.4714.87
123E_DC23:DG3_F0.1070.067-0.341-0.3685.3563.363
13E_DG3:DC23_F-0.1040.043-0.142-1.337-0.3922.464
17E_DG7:DC19_F-0.535-0.034-0.3590.1495.4472.785
117E_DG17:DC9_F-0.364-0.054-0.386-2.495.8695.73
118E_DG18:DC8_F-0.041-0.051-0.414-1.1084.5475.378
12E_DT2:DA24_F0.317-0.041-0.1712.75-4.0080.282
15E_DT5:DA21_F-0.1850.148-0.3553.8552.54-0.382
16E_DT6:DA20_F-0.2340.134-0.2230.6621.42-1.265
112E_DT12:DA14_F-0.0660.188-0.2792.931.725-1.839
113E_DT13:DA13_F-0.4230.066-0.392.4783.9085.52
115E_DT15:DA11_F0.0760.085-0.2982.3673.9153.831
116E_DT16:DA10_F-0.0550.132-0.5015.2052.5671.599
124E_DT24:DA2_F-0.362-0.004-0.094-1.728-2.7665.788
125E_DT25:DA1_F-0.017-0.04-0.1123.5522.141-9.294

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.