A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 2K65  PDB ID: 2K65 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14A_A16:U62_B0.417-0.0310.050.172-18.641-7.89
13A_C15:G63_B-0.63-0.189-0.2697.256-12.243-7.441
15A_C17:G61_B-0.611-0.158-0.4213.297-5.3937.001
11A_G13:C65_B-1.064-0.3310.1414.1612.6151.976
12A_G14:U64_B-1.787-0.5280.039-2.63-6.773-9.538
17A_G19:C59_B0.567-0.167-0.143-0.856-5.4450.692
16A_U18:A60_B0.955-0.184-0.151-2.977-3.6286.839

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.