A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 2K7E  PDB ID: 2K7E 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
17A_A8:U5_B-0.501-0.408-0.045-3.974-10.2382.59
18A_A9:U4_B0.009-0.2570.219-3.119-14.334.209
19A_A10:SUR3_B0.185-0.3030.2614.304-10.693-6.343
110A_A11:U2_B-0.001-0.288-0.02-1.539-2.265-3.536
12A_C2:G11_B0.461-0.3120.058-3.4-7.777-0.636
11A_G1:C12_B-0.625-0.2870.086-12.317-3.5360.271
13A_G3:U10_B-1.877-0.2570.08-1.952-7.565-2.988
14A_G4:C9_B-0.67-0.3590.1032.937-7.52-4.15
15A_G6:A7_B-0.431.169-0.568-1.66-14.902-12.977
111A_G12:C1_B-0.435-0.3110.27311.845-9.447-0.627
16A_U7:A6_B-0.087-0.270.1020.264-19.198-1.198

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.