A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Nov-2022 number of released structures: 12471
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NDB ID: 2K96  PDB ID: 2K96 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
17A_A173:U99_A0.155-2.866-0.173-1.0545.1168.818
18A_A174:U115_A-0.207-0.096-0.0582.019-4.0159.804
19A_A175:U114_A-0.224-0.163-0.366-4.8478.5460.936
110A_A176:U113_A0.7080.203-0.226-12.537-10.0-13.995
114A_A181:U109_A0.930.111-0.503-6.3837.577-14.808
14A_C96:G118_A0.291-0.133-0.284-3.924-2.93-3.39
113A_C180:G110_A-0.381-0.336-1.10115.11-2.991-6.929
116A_C183:G107_A-0.672-0.0410.054-3.3450.685-8.702
11A_G93:C121_A0.5720.0290.132.4043.6255.566
12A_G94:C120_A0.605-0.002-0.251-0.276-2.2047.795
13A_G95:C119_A-0.783-0.34-0.2755.4-4.016-0.607
16A_G98:C116_A0.6290.0120.181-0.761-8.8420.369
111A_G178:C112_A0.343-0.199-0.341-3.297-9.491-2.639
115A_G182:C108_A0.577-0.386-0.8771.20410.454-14.185
15A_U97:A117_A-0.7240.008-0.275-3.5582.2424.152
112A_U179:A111_A0.5250.0040.04913.4093.754-17.601

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.