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As of 11-May-2022 number of released structures: 12077
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NDB ID:
2K96
PDB ID:
2K96
 
Base Pair Morphology Parameters
CSV Format
Model Number
Pair Number
Pair Name
Shear
Stretch
Stagger
Buckle
Propellor
Opening
1
7
A_A173:U99_A
0.155
-2.866
-0.173
-1.054
5.11
68.818
1
8
A_A174:U115_A
-0.207
-0.096
-0.058
2.019
-4.015
9.804
1
9
A_A175:U114_A
-0.224
-0.163
-0.366
-4.847
8.546
0.936
1
10
A_A176:U113_A
0.708
0.203
-0.226
-12.537
-10.0
-13.995
1
14
A_A181:U109_A
0.93
0.111
-0.503
-6.383
7.577
-14.808
1
4
A_C96:G118_A
0.291
-0.133
-0.284
-3.924
-2.93
-3.39
1
13
A_C180:G110_A
-0.381
-0.336
-1.101
15.11
-2.991
-6.929
1
16
A_C183:G107_A
-0.672
-0.041
0.054
-3.345
0.685
-8.702
1
1
A_G93:C121_A
0.572
0.029
0.13
2.404
3.625
5.566
1
2
A_G94:C120_A
0.605
-0.002
-0.251
-0.276
-2.204
7.795
1
3
A_G95:C119_A
-0.783
-0.34
-0.275
5.4
-4.016
-0.607
1
6
A_G98:C116_A
0.629
0.012
0.181
-0.761
-8.842
0.369
1
11
A_G178:C112_A
0.343
-0.199
-0.341
-3.297
-9.491
-2.639
1
15
A_G182:C108_A
0.577
-0.386
-0.877
1.204
10.454
-14.185
1
5
A_U97:A117_A
-0.724
0.008
-0.275
-3.558
2.242
4.152
1
12
A_U179:A111_A
0.525
0.004
0.049
13.409
3.754
-17.601
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.