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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID:
2K96
PDB ID:
2K96
 
Base Pair Morphology Step Parameters
CSV Format
Model Number
Step Number
Step Name
Shift
Slide
Rise
Tilt
Roll
Twist
X-Displacement
Y-Displacement
Helical Rise
Inclination
Tip
Helical Twist
1
7
AA_A173A174:U115U99_AA
0.091
-2.011
2.527
-1.394
14.295
67.766
-2.149
-0.117
2.116
12.675
1.236
69.093
1
8
AA_A174A175:U114U115_AA
-0.419
-0.987
4.27
0.0
-7.873
32.47
0.034
0.729
4.382
-13.828
-0.001
33.386
1
9
AA_A175A176:U113U114_AA
-1.004
-2.118
3.855
6.002
14.429
26.166
-6.901
3.105
2.145
28.831
-11.994
30.408
1
10
AA_A176G178:C112U113_AA
1.118
-0.55
3.082
2.44
18.755
35.729
-2.752
-1.37
2.564
28.263
-3.677
40.281
1
14
AA_A181G182:C108U109_AA
-0.263
-2.317
3.446
2.392
4.939
27.891
-5.843
1.079
2.968
10.123
-4.903
28.415
1
4
AA_C96U97:A117G118_AA
0.961
-0.883
3.422
2.802
15.342
31.724
-3.742
-1.169
2.789
26.18
-4.782
35.262
1
13
AA_C180A181:U109G110_AA
-1.437
-1.112
3.692
-13.421
20.321
51.042
-2.492
0.659
3.322
22.199
14.661
56.2
1
1
AA_G93G94:C120C121_AA
0.624
-1.092
3.517
1.95
24.381
23.2
-5.702
-0.775
1.701
46.998
-3.759
33.589
1
2
AA_G94G95:C119C120_AA
-0.33
-1.712
2.952
-8.211
-5.649
25.385
-2.256
-1.302
3.201
-12.268
17.832
27.241
1
3
AA_G95C96:G118C119_AA
-1.519
-1.658
3.708
-3.714
0.763
39.493
-2.546
1.741
3.798
1.126
5.481
39.668
1
6
AA_G98A173:U99C116_AA
-6.511
-1.284
1.913
8.878
-6.666
11.883
-4.296
23.365
-1.619
-25.935
-34.541
16.249
1
11
AA_G178U179:A111C112_AA
-0.05
-0.969
2.609
-1.601
19.155
20.683
-5.081
-0.156
1.276
43.177
3.609
28.165
1
15
AA_G182C183:G107C108_AA
0.074
-1.13
4.005
-5.496
8.581
35.942
-3.111
-0.977
3.601
13.573
8.694
37.313
1
5
AA_U97G98:C116A117_AA
0.12
-1.568
2.712
-1.619
13.718
23.464
-5.761
-0.542
1.559
30.57
3.607
27.178
1
12
AA_U179C180:G110A111_AA
0.912
-0.808
3.782
4.042
-3.239
30.612
-0.771
-0.781
3.93
-6.081
-7.587
31.037
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.