A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 2KEZ  PDB ID: 2KEZ 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15A_C5:G20_A0.424-0.161-0.3184.214-15.2711.086
16A_C6:U19_A0.473-1.513-0.187.304-14.9316.994
17A_C7:G17_A-0.112-0.047-0.27215.466-19.4730.22
18A_C8:G16_A-0.045-0.129-0.4614.206-23.5634.208
11A_G1:C24_A-0.195-0.205-0.567-6.42116.577-5.647
12A_G2:C23_A-0.44-0.162-0.294-8.007-22.3012.645
110A_G10:A14_A5.829-4.029-2.1242.88614.9137.014
13A_U3:A22_A0.134-0.056-0.347-10.508-21.9844.709
14A_U4:A21_A0.03-0.087-0.516-2.197-18.096-0.823
19A_U9:A15_A-0.324-0.16-0.735-1.838-8.16111.915

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.