A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 2KF0  PDB ID: 2KF0 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15A_C5:G20_A0.526-0.182-0.2478.897-16.3330.171
16A_C6:A18_A-2.110.364-0.80514.714-24.5512.997
17A_C7:G17_A0.055-0.047-0.46323.319-27.911.416
18A_C8:G16_A0.037-0.15-0.4522.187-24.7333.987
11A_G1:C24_A-0.425-0.192-0.551-15.4818.256-3.899
12A_G2:C23_A0.01-0.05-0.356-11.081-14.020.524
110A_G10:A14_A5.864-4.109-1.989-4.5435.9937.898
13A_U3:A22_A-0.016-0.055-0.282-7.164-14.1350.112
14A_U4:A21_A-0.039-0.029-0.4438.368-12.166-2.146
19A_U9:A15_A-0.537-0.117-0.7045.479-15.59310.381

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.