A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 2KP4  PDB ID: 2KP4 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14A_A5L4:U17_B0.269-0.104-0.0414.599-18.466-0.02
16A_A5L6:U15_B-0.008-0.094-0.093-6.613-8.3472.853
17A_A5L7:U14_B0.269-0.093-0.285.626-14.101-0.974
12A_CFL2:G19_B0.163-0.160.533-6.679-1.4230.692
11A_GFL1:C20_B-0.273-0.177-0.0843.0290.129-1.386
19A_GFL9:C12_B-0.003-0.1110.1084.086-9.809-0.077
110A_GFL10:C11_B-0.623-0.251-0.351-15.376-23.3253.112
13A_TAF3:A18_B-0.031-0.004-0.00817.515-7.047-3.571
15A_TAF5:A16_B-0.115-0.051-0.02812.328-23.4735.373
18A_TAF8:A13_B-0.187-0.113-0.228.179-17.6053.162

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.