A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 2KRP  PDB ID: 2KRP 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_C1:G17_A0.104-0.1580.08-0.357-22.069-1.534
13A_C3:G15_A0.691-0.184-0.10623.8-12.53-2.559
14A_G4:C14_A-0.328-0.2330.95528.384-4.909-4.612
15A_G5:C13_A0.425-0.052-0.05110.254-14.83-2.442
12A_U2:A16_A0.072-0.0750.079.252-20.691-6.038

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.