2KRP: Base Pair Morphology Step Parameters

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As of 18-May-2022 number of released structures: 12082

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NDB ID: 2KRP PDB ID: 2KRP

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_C1U2:A16G17_AA	-0.699	-0.584	3.207	-0.701	6.752	30.364	-2.336	1.174	3.024	12.692	1.318	31.096
1	3	AA_C3G4:C14G15_AA	-0.141	-0.558	3.411	-3.601	25.776	32.995	-3.497	-0.182	2.392	38.763	5.415	41.799
1	4	AA_G4G5:C13C14_AA	0.428	-1.377	3.761	7.781	11.905	33.223	-4.078	0.52	3.122	19.734	-12.898	36.06
1	2	AA_U2C3:G15A16_AA	0.381	-0.372	3.246	0.079	5.337	33.111	-1.509	-0.647	3.15	9.29	-0.137	33.527

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.