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A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID:
2KRV
PDB ID:
2KRV
Base Pair Morphology Step Parameters
CSV Format
Model Number
Step Number
Step Name
Shift
Slide
Rise
Tilt
Roll
Twist
X-Displacement
Y-Displacement
Helical Rise
Inclination
Tip
Helical Twist
1
1
AA_C1U2:A16G17_AA
-0.569
-0.892
2.884
7.576
4.391
29.007
-2.455
2.378
2.5
8.524
-14.707
30.273
1
3
AA_C3G4:C14G15_AA
0.416
-1.868
3.795
1.63
11.138
26.104
-6.508
-0.453
2.798
23.328
-3.413
28.389
1
4
AA_G4G5:C13C14_AA
-0.16
-0.943
5.282
3.36
-7.612
35.119
0.251
1.042
5.326
-12.4
-5.475
36.061
1
2
AA_U2C3:G15A16_AA
0.653
-0.103
3.11
-0.127
3.019
37.501
-0.532
-1.028
3.091
4.686
0.197
37.619
The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures',
Nucleic Acids Res
.
31(17)
, 5108-21. Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures',
Nat Protoc
.
3(7)
, 1213-27.
