A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 2KTZ  PDB ID: 2KTZ 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_A3:U36_A0.031-0.0510.5323.5642.062.364
16A_A6:U9_A3.2120.805-2.0755.28949.52592.937
17A_C11:G33_A0.326-0.134-0.262-3.988-5.124-1.887
111A_C15:G28_A0.472-0.154-0.1898.368-2.553-0.908
114A_C18:G25_A0.347-0.136-0.272-3.276-8.1761.635
115A_C19:G24_A0.59-0.203-0.042-4.0269.754-1.598
11A_G1:C38_A-0.394-0.089-0.894-28.418-2.923-0.73
12A_G2:C37_A-0.306-0.056-0.511-19.566-8.290.103
14A_G4:C35_A-0.431-0.147-0.04210.702-11.8231.126
15A_G5:C34_A-0.32-0.0730.13814.9856.274-0.941
19A_G13:C31_A-0.502-0.173-0.023-2.891-16.2470.613
18A_U12:A32_A-0.232-0.0170.268-2.463-4.661.803
110A_U14:G30_A2.219-0.411-0.0873.299-9.7730.445
112A_U16:C27_A-0.448-1.6080.07614.111-20.03210.621
113A_U17:U26_A-2.505-1.786-0.040.138-15.01810.157
116A_U20:G23_A1.536-4.8010.5441.8070.345-91.203

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.