A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
Search for released structures

NDB ID: 2KY0  PDB ID: 2KY0 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12AA_A2C3:G19U20_BB0.333-1.5543.2450.2246.07329.937-4.093-0.5892.88311.605-0.42930.534
15AA_A5G6:A16G17_BB-0.248-2.5683.463-1.4810.03321.835-9.0470.172.10524.8353.66224.049
13AA_C3G4:C18G19_BB0.534-1.6193.1122.93216.10128.984-5.099-0.5232.00429.399-5.35433.199
17AA_C7G8:C14G15_BB-0.51-1.8183.399-2.55416.2431.155-5.2410.4952.24127.9334.39335.131
11AA_G1A2:U20C21_BB-0.267-1.9283.372.9079.39232.246-4.7770.9092.68616.439-5.08833.674
14AA_G4A5:G17C18_BB-0.996-1.6733.1032.644-0.58130.232-3.0852.4023.038-1.111-5.05630.35
16AA_G6C7:G15A16_BB0.896-1.9133.162-4.8130.96232.609-3.525-2.3482.9471.7018.51232.966
18AA_G8U9:A13C14_BB-0.268-1.553.271-1.1525.67730.801-3.8980.2882.95310.5712.14531.328
19AA_U9C10:G12A13_BB0.111-1.9163.267-2.0559.39530.599-5.018-0.5392.56817.2743.77932.04

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.