A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 2KY2  PDB ID: 2KY2 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14A_A4:G14_B-0.0411.624-0.259-2.933-6.014-17.122
17A_C7:G11_B0.401-0.071-0.10313.715-13.5970.428
18A_C8:G10_B0.672-0.169-0.1548.929-12.9510.738
11A_G1:C17_B-0.598-0.166-0.212-10.43-12.341-0.404
12A_G2:C16_B-0.376-0.068-0.118-13.661-14.050.895
15A_G5:A13_B-0.0261.664-0.162-1.574-2.858-18.74
16A_G6:U12_B-2.377-0.4170.2269.661-5.867-2.587
13A_U3:G15_B2.323-0.3240.233-8.276-5.6561.242

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.