A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 25-May-2022 number of released structures: 12098
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NDB ID: 2KYE  PDB ID: 2KYE 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_A2:PSU14_A-0.376-0.0480.2524.836-2.81-10.968
14A_A4:PSU12_A0.396-0.0250.018-5.129-2.040.321
11A_G1:C15_A0.374-0.108-0.1535.8298.581-1.534
13A_G3:C13_A0.621-0.072-0.773-13.296-1.952-1.777
15A_G5:C11_A0.288-0.068-0.0596.261-3.543-6.369
16A_PSU6:G10_A4.0650.1470.3314.1939.52943.872

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.