2KYE: Base Pair Morphology Step Parameters

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As of 18-May-2022 number of released structures: 12082

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NDB ID: 2KYE PDB ID: 2KYE

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	2	AA_A2G3:C13PSU14_AA	1.36	-1.335	4.123	3.973	17.284	37.146	-4.169	-1.42	3.332	25.433	-5.846	41.027
1	4	AA_A4G5:C11PSU12_AA	-0.424	-2.007	2.562	2.227	12.373	34.042	-4.405	0.894	1.721	20.296	-3.653	36.224
1	1	AA_G1A2:PSU14C15_AA	-0.923	-0.475	4.319	-2.762	0.401	26.391	-1.176	1.038	4.384	0.875	6.027	26.535
1	3	AA_G3A4:PSU12C13_AA	-0.681	-1.031	3.569	-4.122	3.808	28.043	-3.025	0.364	3.464	7.76	8.401	28.588
1	5	AA_G5PSU6:G10C11_AA	4.346	-0.473	5.422	-2.598	-19.957	37.24	2.769	-6.487	4.771	-28.821	3.752	42.16

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.