A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 2L8C  PDB ID: 2L8C 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_C1:G18_B-0.098-0.124-0.6213.543-7.807-3.662
12A_C2:G17_B-0.056-0.133-0.183-1.098-10.631-0.044
14A_C4:G15_B0.572-0.043-0.105-3.157-11.6261.422
16A_C7:G12_B0.580.189-0.55526.584-21.5330.304
13A_G3:C16_B-0.289-0.0120.4918.764-1.6291.579
15A_G6:C13_B0.1-0.0270.25-7.732-10.226-0.461
17A_G8:C11_B-0.231-0.215-0.259-12.3590.214-4.105
18A_G9:C10_B-0.306-0.079-0.486-11.59-15.4431.991

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.