2L8C: Base Pair Morphology Step Parameters

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NDB ID: 2L8C PDB ID: 2L8C

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_C1C2:G17G18_BB	0.348	-2.329	3.792	-3.934	2.307	25.767	-5.847	-1.966	3.482	5.123	8.734	26.161
1	2	AA_C2G3:C16G17_BB	0.527	-1.348	3.031	-1.127	9.75	33.654	-3.515	-1.023	2.536	16.411	1.898	35.016
1	4	AA_C4G6:C13G15_BB	0.831	-3.608	6.24	6.708	9.993	63.231	-4.182	-0.251	5.727	9.441	-6.337	64.25
1	6	AA_C7G8:C11G12_BB	-2.184	-2.668	4.208	-10.595	15.932	24.976	-8.511	1.66	2.758	31.587	21.006	31.37
1	3	AA_G3C4:G15C16_BB	-0.163	-1.95	3.557	4.834	13.408	30.631	-5.47	1.042	2.461	23.828	-8.591	33.713
1	5	AA_G6C7:G12C13_BB	0.645	-3.102	2.626	4.322	-1.434	20.941	-7.848	-0.236	2.901	-3.886	-11.713	21.425
1	7	AA_G8G9:C10C11_BB	-0.257	-1.736	3.391	3.145	4.413	30.65	-4.077	1.078	3.076	8.267	-5.892	31.114

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.