A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 2L8W  PDB ID: 2L8W 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_C1:G18_B-0.130.025-0.94929.387-33.7728.619
12A_C2:G17_B0.23-0.12-0.137-1.391-10.0670.419
14A_C4:G15_B0.557-0.301-0.1397.099-14.827-2.026
17A_C7:G12_B0.556-0.294-0.472-2.762-0.455-1.675
13A_G3:C16_B-0.259-0.062-0.631-12.342-3.796-0.828
16A_G6:C13_B-0.483-0.156-0.463-6.0343.092.077
18A_G8:C11_B-0.3980.1470.034-5.4-13.5840.404
19A_G9:C10_B-0.971-0.116-0.475-21.506-32.3477.55
15A_U5:U14_B2.237-1.740.02112.561-17.2524.583

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.