A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 2LA9  PDB ID: 2LA9 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15A_A5:PSU13_A1.2840.299-0.228-8.873-14.287-10.883
16A_C6:A12_A3.532-0.450.493-1.94-6.6262.49
11A_G1:C17_A0.4370.098-0.0248.4322.51912.48
12A_G2:C16_A0.619-0.099-0.32.479-6.041-8.861
13A_G3:C15_A0.671-0.125-0.5065.086-15.322-12.533
14A_G4:C14_A0.671-0.058-0.5361.945-20.533-10.432
17A_U7:A11_A7.067-2.795-1.6372.718-6.838.006

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.