A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 2LAR  PDB ID: 2LAR 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_DA1:U18_B-0.253-0.0510.225-17.29515.3495.586
16A_DC7:G12_B0.393-0.1720.0199.659-29.11-2.018
18A_DC9:G10_B-0.178-0.0580.484-10.722-23.723-3.268
13A_DG3:C16_B-0.194-0.039-0.2171.9689.081-1.22
14A_DG4:C15_B-0.335-0.0680.10519.403-4.3620.494
12A_DT2:A17_B0.216-0.1060.1438.7534.89-0.881
15A_DT5:A14_B-0.1970.18-0.31125.931-24.748-8.947
17A_DT8:A11_B0.282-0.0240.1424.023-20.317-2.816

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.