2LAR: Base Pair Morphology Step Parameters

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As of 31-May-2023 number of released structures: 12820

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NDB ID: 2LAR PDB ID: 2LAR

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_DA1DT2:A17U18_BB	-0.611	-1.765	3.01	5.854	2.789	25.535	-4.527	2.709	2.603	6.185	-12.978	26.332
1	6	AA_DC7DT8:A11G12_BB	-0.294	-0.871	3.374	3.768	6.206	36.48	-2.198	0.967	3.144	9.795	-5.947	37.171
1	3	AA_DG3DG4:C15C16_BB	0.207	-1.232	3.022	-1.152	4.154	27.784	-3.411	-0.669	2.801	8.584	2.38	28.11
1	4	AA_DG4DT5:A14C15_BB	-0.45	-0.446	3.271	4.916	1.504	33.67	-0.999	1.541	3.153	2.578	-8.425	34.049
1	2	AA_DT2DG3:C16A17_BB	-1.285	-0.675	3.277	-3.332	17.614	35.876	-2.969	1.504	2.769	26.645	5.04	39.973
1	5	AA_DT5DC7:G12A14_BB	0.625	-2.589	6.691	6.638	19.828	67.47	-3.63	-0.081	5.865	17.429	-5.835	70.268
1	7	AA_DT8DC9:G10A11_BB	0.65	-0.477	3.345	-0.528	4.323	35.453	-1.411	-1.137	3.256	7.067	0.862	35.711

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.