A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search for released structures

NDB ID: 2LB4  PDB ID: 2LB4 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_DA1:U18_B0.2140.044-0.104-11.80411.2496.023
16A_DC7:G12_B0.089-0.082-0.10313.5-11.724-4.726
18A_DC9:G10_B-0.064-0.0210.1622.555-27.4571.081
13A_DG3:C16_B-0.198-0.122-0.249-0.888-14.124-0.756
14A_DG4:C15_B-0.013-0.024-0.275-14.662-10.6321.634
12A_DT2:A17_B-0.455-0.056-0.28511.8191.17711.45
15A_DT5:A14_B-0.0550.0360.264-9.947-11.4055.712
17A_DT8:A11_B-0.2840.068-0.17913.314-15.941-10.109

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.