2LB4: Base Pair Morphology Step Parameters

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NDB ID: 2LB4 PDB ID: 2LB4

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_DA1DT2:A17U18_BB	0.07	-2.064	2.957	1.984	5.882	22.04	-6.925	0.404	2.331	15.007	-5.061	22.887
1	6	AA_DC7DT8:A11G12_BB	-0.433	-1.442	3.367	1.382	4.802	30.681	-3.606	1.071	3.089	9.0	-2.59	31.076
1	3	AA_DG3DG4:C15C16_BB	-0.353	-1.466	3.554	-0.88	9.318	35.326	-3.671	0.438	3.089	15.031	1.419	36.506
1	4	AA_DG4DT5:A14C15_BB	0.698	-0.996	3.105	-3.356	7.097	27.593	-3.454	-2.091	2.669	14.511	6.863	28.667
1	2	AA_DT2DG3:C16A17_BB	-2.089	-0.683	3.553	-4.772	4.597	38.328	-1.648	2.493	3.674	6.938	7.202	38.875
1	5	AA_DT5DC7:G12A14_BB	-0.217	-2.658	5.903	4.47	12.388	60.153	-3.612	0.577	5.291	12.201	-4.402	61.446
1	7	AA_DT8DC9:G10A11_BB	0.91	-0.761	3.402	1.906	6.0	39.064	-1.85	-1.115	3.294	8.903	-2.828	39.548

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.