2LBJ: Base Pair Morphology Step Parameters

A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 31-May-2023 number of released structures: 12820

Search for released structures

NDB ID: 2LBJ PDB ID: 2LBJ

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	2	AA_C4C5:G13G14_AA	0.24	-0.776	4.086	0.723	5.664	35.611	-2.243	-0.262	3.924	9.188	-1.173	36.051
1	3	AA_C5U6:A12G13_AA	-0.702	-1.154	5.115	-1.015	-1.622	24.93	-1.903	1.144	5.202	-3.749	2.348	25.003
1	1	AA_G1G2:C16C17_AA	0.13	-1.024	4.73	-1.445	1.822	28.907	-2.622	-0.717	4.646	3.642	2.889	28.999
1	4	AA_U6U7:A11A12_AA	1.036	-0.643	2.934	-3.689	-10.835	21.961	1.53	-3.451	2.735	-26.269	8.945	24.732

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.