2LBL: Base Pair Morphology Parameters

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As of 11-May-2022 number of released structures: 12077

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NDB ID: 2LBL PDB ID: 2LBL

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	4	A_A4:U14_A	0.048	0.236	-0.426	-5.349	0.433	1.196
1	5	A_C5:G13_A	0.827	-0.091	-0.021	-3.244	-6.158	-7.037
1	1	A_G1:C17_A	-0.267	0.067	1.014	27.615	6.328	-8.81
1	2	A_G2:U16_A	-2.836	-0.525	1.065	26.266	9.342	-13.227
1	3	A_G3:C15_A	-0.821	-0.271	0.395	11.487	-1.889	-10.515

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.