A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 2LI4  PDB ID: 2LI4 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_A3:U30_A-0.807-0.307-0.268-3.6693.0556.922
17A_A7:U26_A0.078-0.130.1840.79-14.854-6.485
19A_A9:U24_A-0.403-0.316-0.223-2.939-9.3060.61
110A_A10:U23_A-0.408-0.261-0.241-0.693-5.8392.876
114A_A14:U19_A0.089-0.244-0.209-0.6571.6320.641
14A_C4:G29_A0.774-0.143-0.0991.019-3.7522.922
15A_C5:G28_A-0.778-0.205-0.7748.8640.71-7.79
11A_G1:C32_A0.484-0.068-0.094-3.578-3.713-3.078
12A_G2:C31_A-0.291-0.124-0.361-3.025.9820.333
16A_G6:C27_A-0.746-0.296-0.1241.935-5.5050.048
111A_G11:C22_A-0.73-0.329-0.494-8.78-7.1670.906
112A_G12:C21_A0.2130.063-0.059-6.432-1.1023.309
115A_G15:A18_A5.278-2.671.7953.6459.6-39.195
18A_U8:A25_A0.141-0.079-0.1845.363-17.1230.495
113A_U13:G20_A1.82-0.178-0.274-0.859-4.0940.207

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.