2M21: Base Pair Morphology Step Parameters

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As of 31-May-2023 number of released structures: 12820

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NDB ID: 2M21 PDB ID: 2M21

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	5	AA_A5U6:A16U17_AA	0.05	-1.083	4.053	-0.916	9.249	29.083	-4.252	-0.312	3.546	17.851	1.768	30.501
1	7	AA_A7C8:U14U15_AA	-1.244	-1.236	3.889	0.244	16.75	27.035	-5.617	2.325	2.676	32.204	-0.468	31.722
1	3	AA_C3G4:C18G19_AA	-1.27	-0.425	3.562	-5.745	12.756	33.043	-2.713	1.156	3.346	21.28	9.584	35.806
1	1	AA_G1G2:C20C21_AA	-1.143	-0.537	3.437	-4.776	8.679	35.592	-2.088	1.124	3.34	13.871	7.633	36.902
1	2	AA_G2C3:G19C20_AA	0.183	-0.866	4.353	-0.09	-1.33	29.614	-1.317	-0.383	4.386	-2.601	0.175	29.643
1	4	AA_G4A5:U17C18_AA	-0.981	-0.425	4.028	-2.662	17.652	35.645	-3.132	1.065	3.509	26.86	4.05	39.735
1	6	AA_U6A7:U15A16_AA	-1.219	-0.714	3.423	0.39	24.295	38.432	-3.092	1.619	2.551	33.184	-0.533	45.222

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.